MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3043_ses-1_T1w.
  • Date and time: 2022-10-24, 13:29.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6545671788049203
cnr2.0266471240921824
efc0.5986174303710281
fber1543.398526234568
fwhmavg4.25772
fwhmx4.14852
fwhmy4.82543
fwhmz3.79921
icvscsf0.19194715867165732
icvsgm0.4186901931889493
icvswm0.3893626481393934
inumed1.8755626678466797
inurange0.9427130222320557
qi15.271655459448904e-05
qi20.00247804509826695
rpvecsf26.930604756192224
rpvegm13.262520919745205
rpvewm16.83917208226811
sizex176
sizey256
sizez256
snrcsf3.360375715555524
snrgm9.627526801059235
snrtotal10.013590241027671
snrwm17.052868206468258
snrdcsf33.489073034121276
snrdgm70.95509101305818
snrdtotal64.61360315188053
snrdwm89.39664540846213
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk12.042370525085689
summarybgmad7.328807515423253
summarybgmean16.68711373789913
summarybgmedian14.514092892408371
summarybgn2473695.0
summarybgp054.838030964136124
summarybgp9536.81110516190529
summarybgstdv11.214694399619104
summarycsfk0.44514632562070666
summarycsfmad103.69482973949921
summarycsfmean396.8433445355942
summarycsfmedian374.63187596201897
summarycsfn18982.0
summarycsfp05255.20613335818052
summarycsfp95617.4247787866742
summarycsfstdv111.48217921454379
summarygmk0.23218493810471008
summarygmmad78.43383362250843
summarygmmean799.7269433968788
summarygmmedian793.7526018768549
summarygmn21974.0
summarygmp05675.0104940831661
summarygmp95949.9026806090026
summarygmstdv82.44428261754106
summarywmk0.3268306502284064
summarywmmad56.603343151034906
summarywmmean1002.2188940778905
summarywmmedian1000.0525526627898
summarywmn231412.0
summarywmp05908.8135991543531
summarywmp951101.2830918580294
summarywmstdv58.644116625439125
tpmoverlapcsf0.16213524341583252
tpmoverlapgm0.4388342499732971
tpmoverlapwm0.4880245625972748
wm2max0.5591673325957734
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime09:09:20.670000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[-0.0082855, 0.950004, 0.312128, -0.0409975, 0.311554, -0.949344]
ImageOrientationTextSag>Tra(2.1)>Cor(-1.2)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0352048
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2605, 5390, -7483, 225, -90, -918, 192, -81]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp241.72
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum73f18dbec3a6efe7afb7514c15fc7ef2
softwaremriqc
version0.16.1
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For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.